Department of Biotechnology and Bioinformatics

Bioinformatics and Biology Insights

Bioinformatics and Biology Insights

Impact of Aligner, Normalization Method, and Sequencing Depth on TempO-seq Accuracy

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. High-throughput transcriptomics has advanced through the introduction of TempO-seq, a targeted alternative to traditional RNA-seq. TempO-seq platforms use 50 nucleotide prob…

By Logan J Everett, 4 years ago
Bioinformatics and Biology Insights

From Beginning to End: Expanding the SERINC3 Interactome Through an in silico Analysis

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. The serine incorporator (SERINC) family of proteins are a family of multipass transmembrane proteins associated with biosynthesis of serine-containing phospholipids and sphi…

By Mckenzie Tu, 4 years ago
Bioinformatics and Biology Insights

In Silico Identification and Characterization of a Hypothetical Protein From Rhodobacter capsulatus Revealing S-Adenosylmethionine-Dependent Methyltransferase Activity

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. Rhodobacter capsulatus is a purple non-sulfur bacteria widely used as a model organism to study bacterial photosynthesis. It exhibits extensive metabolic activities and demo…

By Spencer Mark Mondol, 4 years ago
Bioinformatics and Biology Insights

Modeling and Simulation of Cell Signaling Networks for Subsequent Analytics Processes Using Big Data and Machine Learning

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. This work explores how much the traditional approach to modeling and simulation of biological systems, specifically cell signaling networks, can be increased and improved by…

By Máximo Eduardo Sánchez-Gutiérrez, 4 years ago
Bioinformatics and Biology Insights

Applied Machine Learning Toward Drug Discovery Enhancement: Leishmaniases as a Case Study

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. Drug discovery (DD) research is a complex field with a high attrition rate. Machine learning (ML) approaches combined to chemoinformatics are of valuable input to this field…

By Emna Harigua-Souiai, 4 years ago
Bioinformatics and Biology Insights

RNA Editing–Associated Post-Transcriptional Gene Regulation in Rheumatoid Arthritis

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. Background:Rheumatoid arthritis (RA) is an autoimmune disease characterised by systemic inflammation of joints. The observed complexity of RA pathogenesis and studies that h…

By Yashoda Ghanekar, 4 years ago
Bioinformatics and Biology Insights

Sea Cucumber Compounds Targeting NF-κB in Cancer Treatment

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. Cancer is a major health problem worldwide and the leading cause of death in many countries. It remains challenging to find anticancer treatments that work efficiently for v…

By Teresa Liliana Wargasetia, 4 years ago
Bioinformatics and Biology Insights

Integrative Analysis for Identification of Therapeutic Targets and Prognostic Signatures in Non-Small Cell Lung Cancer

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. Differential expressions of certain genes during tumorigenesis may serve to identify novel manageable targets in the clinic. In this work with an integrated bioinformatics a…

By Özgür Cem Erkin, 4 years ago
Bioinformatics and Biology Insights

Modeling the Cluster Size Distribution of Vascular Endothelial Growth Factor (VEGF) Receptors

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. We previously developed a method of defining receptor clusters in the membrane based on mutual distance and applied it to a set of transmission microscopy images of vascular…

By Emine Güven, 4 years ago
Bioinformatics and Biology Insights

Molnupiravir Does Not Induce Mutagenesis in Host Lung Cells during SARS-CoV-2 Treatment

Bioinformatics and Biology Insights, Volume 16, Issue , January-December 2022. As SARS-CoV-2 continues to evolve and spread with the emergence of new variants, interest in small molecules with broad-spectrum antiviral activity has grown. One such molec…

By John Maringa Githaka, 4 years ago

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