Department of Biochemistry

Molecular Biology

Life Science Alliance

Transcription arrest induces formation of RNA granules in mitochondria

Mitochondrial gene expression regulation is required for the biogenesis of oxidative phosphorylation (OXPHOS) complexes, yet the spatial organization of mitochondrial RNAs (mt-RNAs) remains unknown. Here, we investigated the spatial distribution of mt…

By Hansen, K. G., Baxter-Koenigs, A., Weiss, C. A., McShane, E., Churchman, L. S., 6 months ago
Life Science Alliance

Transcription arrest induces formation of RNA granules in mitochondria

Mitochondrial gene expression regulation is required for the biogenesis of oxidative phosphorylation (OXPHOS) complexes, yet the spatial organization of mitochondrial RNAs (mt-RNAs) remains unknown. Here, we investigated the spatial distribution of mt…

By Hansen, K. G., Baxter-Koenigs, A., Weiss, C. A., McShane, E., Churchman, L. S., 6 months ago
Life Science Alliance

Assessment of PRMT6-dependent alternative splicing in pluripotent and differentiating NT2/D1 cells

Protein arginine methyltransferase 6 (PRMT6) is a well-characterized epigenetic regulator that methylates histone H3 at arginine 2 (H3R2me2a) in both promoter and enhancer regions, thereby modulating transcriptional initiation. We report here that PRM…

By Eudenbach, M., Busam, J., Bouchard, C., Rossbach, O., Zarnack, K., Bauer, U.-M., 10 months ago
Life Science Alliance

Endo-bind-n-seq: identifying RNA motifs of RNA binding proteins isolated from endogenous sources

RNA binding proteins (RBPs) are crucial regulators of gene expression and critically depend on the specific recognition of their target RNAs. Accordingly, a selection of methods to analyze RBP specificities has been developed, including protein-RNA cr…

By , 1 year ago
Life Science Alliance

Fatty acid synthase inhibition alleviates lung fibrosis via {beta}-catenin signal in fibroblasts

Idiopathic pulmonary fibrosis is a progressive and lethal interstitial lung disease with an unclear etiology and limited treatment options. Fatty acid synthase (FASN) plays various roles in metabolic-related diseases. This study demonstrates that FASN…

By , 1 year ago
Life Science Alliance

Naa80 is required for actin N-terminal acetylation and normal hearing in zebrafish

Actin is a critical component of the eukaryotic cytoskeleton. In animals, actins undergo unique N-terminal processing by dedicated enzymes resulting in mature acidic and acetylated forms. The final step, N-terminal acetylation, is catalyzed by NAA80 i…

By Ree, R., Lin, S.-J., Sti Dahl, L. O., Huang, K., Petree, C., Varshney, G. K., Arnesen, T., 1 year ago
Life Science Alliance

Naa80 is required for actin N-terminal acetylation and normal hearing in zebrafish

Actin is a critical component of the eukaryotic cytoskeleton. In animals, actins undergo unique N-terminal processing by dedicated enzymes resulting in mature acidic and acetylated forms. The final step, N-terminal acetylation, is catalyzed by NAA80 i…

By Ree, R., Lin, S.-J., Sti Dahl, L. O., Huang, K., Petree, C., Varshney, G. K., Arnesen, T., 1 year ago
Life Science Alliance

Naa80 is required for actin N-terminal acetylation and normal hearing in zebrafish

Actin is a critical component of the eukaryotic cytoskeleton. In animals, actins undergo unique N-terminal processing by dedicated enzymes resulting in mature acidic and acetylated forms. The final step, N-terminal acetylation, is catalyzed by NAA80 i…

By Ree, R., Lin, S.-J., Sti Dahl, L. O., Huang, K., Petree, C., Varshney, G. K., Arnesen, T., 1 year ago
Life Science Alliance

Naa80 is required for actin N-terminal acetylation and normal hearing in zebrafish

Actin is a critical component of the eukaryotic cytoskeleton. In animals, actins undergo unique N-terminal processing by dedicated enzymes resulting in mature acidic and acetylated forms. The final step, N-terminal acetylation, is catalyzed by NAA80 i…

By Ree, R., Lin, S.-J., Sti Dahl, L. O., Huang, K., Petree, C., Varshney, G. K., Arnesen, T., 1 year ago
Life Science Alliance

Epithelial-specific loss of Smad4 alleviates the fibrotic response in an acute colitis mouse model

Mucosal healing is associated with better clinical outcomes in patients with inflammatory bowel disease. But the epithelial-specific contribution to mucosal healing in vivo is poorly understood. We evaluated mucosal healing in an acute dextran sulfate…

By , 1 year ago

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